peakfinding.h File Reference

#include "Math/VespucciMath.h"
#include "Global/libvespucci.h"

Go to the source code of this file.

Namespaces
	Vespucci
	A namespace for "global" functions, including math functions.
	Vespucci::Math
	A namespace for math functions relating to linear least squares regression.
	Vespucci::Math::PeakFinding
	A namespace for math functions relating to peak detection and counting.

Functions
VESPUCCI_EXPORT arma::vec	Vespucci::Math::PeakFinding::FindPeaks (arma::vec X, arma::vec dX, double sel, double threshold, arma::vec &peak_magnitudes)
	Vespucci::Math::PeakFinding::FindPeaks an implementation of the peakfinder arma::mat routine. More...
VESPUCCI_EXPORT arma::uvec	Vespucci::Math::PeakFinding::FindPeakPositions (arma::vec X, arma::vec dX, double sel, double threshold, arma::uvec &local_minima)
VESPUCCI_EXPORT arma::mat	Vespucci::Math::PeakFinding::FindPeaksMat (arma::mat X, double sel, double threshold, arma::uword poly_order, arma::uword window_size, arma::mat &peak_magnitudes)
	Vespucci::Math::PeakFinding::FindPeaksMat Performs FindPeaks on a spectra arma::matrix. More...
VESPUCCI_EXPORT arma::vec	Vespucci::Math::PeakFinding::EstimateBaseline (arma::vec X, arma::umat peaks, arma::uword window_size)
	EstimateBaseline. More...
VESPUCCI_EXPORT arma::umat	Vespucci::Math::PeakFinding::FindPeakPositions (arma::vec X, arma::vec dX, double threshold, std::string threshold_method, arma::vec &peak_magnitudes)
	Vespucci::Math::PeakFinding::FindPeakPositions. More...
VESPUCCI_EXPORT arma::vec	Vespucci::Math::PeakFinding::PeakPopulation (arma::uword vector_size, arma::umat peak_positions)
VESPUCCI_EXPORT arma::vec	Vespucci::Math::PeakFinding::PeakExtrema (arma::uword vector_size, arma::umat peak_positions)